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Raw Signal Density Graphs of Neurosphere Cultured Cells Cortex Derived mRNA-Seq Data
Illumina mRNA-Seq read mappings from Neurosphere Cultured Cells Cortex Derived, Donor HuFNSC03 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2011/7/20:
ANALYSIS XML file 'ucsf-ubc.mrna-seq.level.2.xml' uploaded
alias: A04599-1.hg19.level.2.release.4
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UCSF-UBC.Neurosphere_Cultured_Cells_Cortex_Derived.mRNA-Seq.HuFNSC03.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: mRNA-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 4
BROWSER_TRACK_NAME: NCD mRNA 03
BROWSER_TRACK_DESCRIPTION: UCSF-UBC-USC Neurosphere Cultured Cells Cortex Derived mRNA-Seq Donor HuFNSC03 Library A04599-1 EA Release 4
NUMBER_OF_MAPPED_READS: 118,213,421
NUMBER_OF_MRNA-SEQ_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 10
PERCENT_READS_MAPPING_TO_UCSC_GENES: 95.28
PERCENT_READS_MAPPING_TO_UCSC_GENES_PERCENTILE: 70
MAXIMUM_REPLICATE_CORRELATION: 0.87
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UCSF-UBC.Neurosphere_Cultured_Cells_Cortex_Derived.mRNA-Seq.HuFNSC03.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: mRNA-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 4
BROWSER_TRACK_NAME: NCD mRNA 03
BROWSER_TRACK_DESCRIPTION: UCSF-UBC-USC Neurosphere Cultured Cells Cortex Derived mRNA-Seq Donor HuFNSC03 Library A04599-1 EA Release 4
NUMBER_OF_MAPPED_READS: 118,213,421
NUMBER_OF_MRNA-SEQ_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 10
PERCENT_READS_MAPPING_TO_UCSC_GENES: 95.28
PERCENT_READS_MAPPING_TO_UCSC_GENES_PERCENTILE: 70
MAXIMUM_REPLICATE_CORRELATION: 0.87
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