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Raw Signal Density Graphs of Fetal Intestine Small Chromatin Accessibility Data
Illumina DNAse-Seq read mappings from Fetal Intestine Small, Donor H-23808, Library DS17425 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2011/6/22:
ANALYSIS XML file 'uw.chromatin.accessibility.level.2.release.4.xml' uploaded
alias: DS17425.hg19.level.2.release.4
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Fetal_Intestine_Small.ChromatinAccessibility.H-23808.DS17425.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 4
BROWSER_TRACK_NAME: FIS DNase 08 25
BROWSER_TRACK_DESCRIPTION: UW Fetal Intestine Small DNase Hypersensitivity Donor H-23808 Library DS17425 EA Release 4
NUMBER_OF_MAPPED_READS: 30,474,532
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 52
FINDPEAKS_SCORE: 0.3907
FINDPEAKS_PERCENTILE: 56
HOTSPOT_SCORE: 0.3824
HOTSPOT_PERCENTILE: 48
IROC_SCORE: 0.9669
IROC_PERCENTILE: 2
POISSON_SCORE: 0.428
POISSON_PERCENTILE: 43
MAXIMUM_REPLICATE_CORRELATION: 0.99
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Fetal_Intestine_Small.ChromatinAccessibility.H-23808.DS17425.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 4
BROWSER_TRACK_NAME: FIS DNase 08 25
BROWSER_TRACK_DESCRIPTION: UW Fetal Intestine Small DNase Hypersensitivity Donor H-23808 Library DS17425 EA Release 4
NUMBER_OF_MAPPED_READS: 30,474,532
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 52
FINDPEAKS_SCORE: 0.3907
FINDPEAKS_PERCENTILE: 56
HOTSPOT_SCORE: 0.3824
HOTSPOT_PERCENTILE: 48
IROC_SCORE: 0.9669
IROC_PERCENTILE: 2
POISSON_SCORE: 0.428
POISSON_PERCENTILE: 43
MAXIMUM_REPLICATE_CORRELATION: 0.99
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