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Raw Signal Density Graphs of CD3 Primary Cells Chromatin Accessibility Data
Illumina DNAse-Seq read mappings from CD3 Primary Cells, Donor RO 01736, Library DS17534 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2011/6/22:
ANALYSIS XML file 'uw.chromatin.accessibility.level.2.release.4.xml' uploaded
alias: DS17534.hg19.level.2.release.4
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.CD3_Primary_Cells.ChromatinAccessibility.RO_01701.DS17534.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 4
BROWSER_TRACK_NAME: CD3 DNase 36 34
BROWSER_TRACK_DESCIPTION: UW CD3 Primary Cells DNase Hypersensitivity Donor RO 01701 Library DS17534 EA Release 4
NUMBER_OF_MAPPED_READS: 37,463,214
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 52
FINDPEAKS_SCORE: 0.3801
FINDPEAKS_PERCENTILE: 48
HOTSPOT_SCORE: 0.364
HOTSPOT_PERCENTILE: 43
IROC_SCORE: 0.9876
IROC_PERCENTILE: 9
POISSON_SCORE: 0.4339
POISSON_PERCENTILE: 50
MAXIMUM_REPLICATE_CORRELATION: 0.94
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.CD3_Primary_Cells.ChromatinAccessibility.RO_01701.DS17534.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 4
BROWSER_TRACK_NAME: CD3 DNase 36 34
BROWSER_TRACK_DESCIPTION: UW CD3 Primary Cells DNase Hypersensitivity Donor RO 01701 Library DS17534 EA Release 4
NUMBER_OF_MAPPED_READS: 37,463,214
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 52
FINDPEAKS_SCORE: 0.3801
FINDPEAKS_PERCENTILE: 48
HOTSPOT_SCORE: 0.364
HOTSPOT_PERCENTILE: 43
IROC_SCORE: 0.9876
IROC_PERCENTILE: 9
POISSON_SCORE: 0.4339
POISSON_PERCENTILE: 50
MAXIMUM_REPLICATE_CORRELATION: 0.94
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