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Raw Signal Density Graphs of Fetal Intestine Large Chromatin Accessibility Data
Illumina DNAse-Seq read mappings from Fetal Intestine Large, Donor H-23855, Library DS17502 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2011/6/22:
ANALYSIS XML file 'uw.chromatin.accessibility.level.2.release.4.xml' uploaded
alias: DS17502.hg19.level.2.release.4
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Fetal_Intestine_Large.ChromatinAccessibility.H-23855.DS17502.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 4
BROWSER_TRACK_NAME: FIL DNase 55 02
BROWSER_TRACK_DESCRIPTION: UW Fetal Intestine Large DNase Hypersensitivity Donor H-23855 Library DS17502 EA Release 4
NUMBER_OF_MAPPED_READS: 31,196,282
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 52
FINDPEAKS_SCORE: 0.3462
FINDPEAKS_PERCENTILE: 30
HOTSPOT_SCORE: 0.3448
HOTSPOT_PERCENTILE: 33
IROC_SCORE: 0.9965
IROC_PERCENTILE: 74
POISSON_SCORE: 0.3361
POISSON_PERCENTILE: 13
MAXIMUM_REPLICATE_CORRELATION: 0.97
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Fetal_Intestine_Large.ChromatinAccessibility.H-23855.DS17502.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 4
BROWSER_TRACK_NAME: FIL DNase 55 02
BROWSER_TRACK_DESCRIPTION: UW Fetal Intestine Large DNase Hypersensitivity Donor H-23855 Library DS17502 EA Release 4
NUMBER_OF_MAPPED_READS: 31,196,282
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 52
FINDPEAKS_SCORE: 0.3462
FINDPEAKS_PERCENTILE: 30
HOTSPOT_SCORE: 0.3448
HOTSPOT_PERCENTILE: 33
IROC_SCORE: 0.9965
IROC_PERCENTILE: 74
POISSON_SCORE: 0.3361
POISSON_PERCENTILE: 13
MAXIMUM_REPLICATE_CORRELATION: 0.97
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