|
|
| Home | Browser | Tools | Log Out |
Help
|
Raw Signal Density Graphs of Fetal Lung Left Chromatin Accessibility Data
Illumina DNAse-Seq read mappings from Fetal Lung Left, Donor H-23914, Library DS17739 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2011/6/22:
ANALYSIS XML file 'uw.chromatin.accessibility.level.2.release.4.xml' uploaded
alias: DS17739.hg19.level.2.release.4
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Fetal_Lung_Left.ChromatinAccessibility.H-23914.DS17739.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 4
BROWSER_TRACK_NAME: FLL DNase 14 39
BROWSER_TRACK_DESCRIPTION: UW Fetal Lung Left DNase Hypersensitivity Donor H-23914 Library DS17739 EA Release 4
NUMBER_OF_MAPPED_READS: 22,605,963
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 52
FINDPEAKS_SCORE: 0.5091
FINDPEAKS_PERCENTILE: 85
HOTSPOT_SCORE: 0.5168
HOTSPOT_PERCENTILE: 87
IROC_SCORE: 0.9952
IROC_PERCENTILE: 61
POISSON_SCORE: 0.5304
POISSON_PERCENTILE: 81
MAXIMUM_REPLICATE_CORRELATION: 0.96
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Fetal_Lung_Left.ChromatinAccessibility.H-23914.DS17739.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 4
BROWSER_TRACK_NAME: FLL DNase 14 39
BROWSER_TRACK_DESCRIPTION: UW Fetal Lung Left DNase Hypersensitivity Donor H-23914 Library DS17739 EA Release 4
NUMBER_OF_MAPPED_READS: 22,605,963
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 52
FINDPEAKS_SCORE: 0.5091
FINDPEAKS_PERCENTILE: 85
HOTSPOT_SCORE: 0.5168
HOTSPOT_PERCENTILE: 87
IROC_SCORE: 0.9952
IROC_PERCENTILE: 61
POISSON_SCORE: 0.5304
POISSON_PERCENTILE: 81
MAXIMUM_REPLICATE_CORRELATION: 0.96
|
Genboree is built & maintained by the Bioinformatics Research Laboratory
at Baylor College of Medicine.
Genboree is a hosted service. Code is available
free for academic use.
|
|
|
© 2001-2013 Bioinformatics Research Laboratory
(400D Jewish Wing, MS:BCM225, 1 Baylor Plaza, Houston, TX 77030, 713-798-5433) |
|