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Raw Signal Density Graphs of Breast vHMEC Chromatin Accessibility Data
Illumina DNAse-Seq read mappings from Breast vHMEC, Donor RM035, Library DS18406 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2011/6/22:
ANALYSIS XML file 'uw.chromatin.accessibility.level.2.release.4.xml' uploaded
alias: DS18406.hg19.level.2.release.4
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Breast_vHMEC.ChromatinAccessibility.RM035.DS18406.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 4
BROWSER_TRACK_NAME: Bv DNase 35 06
BROWSER_TRACK_DESCRIPTION: UW Breast vHMEC DNase Hypersensitivity Donor RM035 Library DS18406 EA Release 4
NUMBER_OF_MAPPED_READS: 31,386,613
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 52
FINDPEAKS_SCORE: 0.3982
FINDPEAKS_PERCENTILE: 61
HOTSPOT_SCORE: 0.4808
HOTSPOT_PERCENTILE: 80
IROC_SCORE: 0.9973
IROC_PERCENTILE: 93
POISSON_SCORE: 0.5033
POISSON_PERCENTILE: 69
MAXIMUM_REPLICATE_CORRELATION: 1.0
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Breast_vHMEC.ChromatinAccessibility.RM035.DS18406.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 4
BROWSER_TRACK_NAME: Bv DNase 35 06
BROWSER_TRACK_DESCRIPTION: UW Breast vHMEC DNase Hypersensitivity Donor RM035 Library DS18406 EA Release 4
NUMBER_OF_MAPPED_READS: 31,386,613
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 52
FINDPEAKS_SCORE: 0.3982
FINDPEAKS_PERCENTILE: 61
HOTSPOT_SCORE: 0.4808
HOTSPOT_PERCENTILE: 80
IROC_SCORE: 0.9973
IROC_PERCENTILE: 93
POISSON_SCORE: 0.5033
POISSON_PERCENTILE: 69
MAXIMUM_REPLICATE_CORRELATION: 1.0
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