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Raw Signal Density Graphs of Mobilized CD4 Primary Cells Chromatin Accessibility Data
Illumina DNAse-Seq read mappings from Mobilized CD4 Primary Cells, Donor RO 01679, Library DS16955 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2011/6/22:
ANALYSIS XML file 'uw.chromatin.accessibility.level.2.release.4.xml' uploaded
alias: DS16955.hg19.level.2.release.4
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Mobilized_CD4_Primary_Cells.ChromatinAccessibility.RO_01679.DS16955.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 4
BROWSER_TRACK_NAME: MCD4 DNase 79 55
BROWSER_TRACK_DESCRIPTION: UW Mobilized CD4 Primary Cells DNase Hypersensitivity Donor RO 01679 Library DS16955 EA Release 4
NUMBER_OF_MAPPED_READS: 39,459,639
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 52
FINDPEAKS_SCORE: 0.371
FINDPEAKS_PERCENTILE: 41
HOTSPOT_SCORE: 0.3595
HOTSPOT_PERCENTILE: 35
IROC_SCORE: 0.9936
IROC_PERCENTILE: 46
POISSON_SCORE: 0.4193
POISSON_PERCENTILE: 41
MAXIMUM_REPLICATE_CORRELATION: 0.99
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Mobilized_CD4_Primary_Cells.ChromatinAccessibility.RO_01679.DS16955.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 4
BROWSER_TRACK_NAME: MCD4 DNase 79 55
BROWSER_TRACK_DESCRIPTION: UW Mobilized CD4 Primary Cells DNase Hypersensitivity Donor RO 01679 Library DS16955 EA Release 4
NUMBER_OF_MAPPED_READS: 39,459,639
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 52
FINDPEAKS_SCORE: 0.371
FINDPEAKS_PERCENTILE: 41
HOTSPOT_SCORE: 0.3595
HOTSPOT_PERCENTILE: 35
IROC_SCORE: 0.9936
IROC_PERCENTILE: 46
POISSON_SCORE: 0.4193
POISSON_PERCENTILE: 41
MAXIMUM_REPLICATE_CORRELATION: 0.99
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