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Raw Signal Density Graphs of Brain Mid Frontal Lobe Histone H3K9ac ChIP-Seq Data
Illumina Histone H3K9ac ChIP-Seq read mappings from Brain Mid Frontal Lobe, Donor 112 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2011/3/18:
ANALYSIS XML file 'bi.chip-seq.level.2.release.3.xml' uploaded
alias: Lib:XZ:20100924:05--ChIP:XZ:20100914:05:mid frontal lobe:H3K9Ac.hg19.level.2.release.3
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: BI.Brain_Mid_Frontal_Lobe.H3K9ac.112.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: ChIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained.
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 3
BROWSER_TRACK_NAME: BMFL H3K9ac 12
BROWSER_TRACK_DESCRIPTION: BI Brain Mid Frontal Lobe Histone H3K9ac Donor 112 Library Lib:XZ:20100924:05--ChIP:XZ:20100914:05:mid frontal lobe:H3K9Ac EA Release 3
NUMBER_OF_H3K9ac_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 40
FINDPEAKS_SCORE: 0.1223
FINDPEAKS_PERCENTILE: 28
HOTSPOT_SCORE: 0.1811
HOTSPOT_PERCENTILE: 28
IROC_SCORE: 0.9871
IROC_PERCENTILE: 8
POISSON_SCORE: 0.2746
POISSON_PERCENTILE: 28
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: BI.Brain_Mid_Frontal_Lobe.H3K9ac.112.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: ChIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained.
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 3
BROWSER_TRACK_NAME: BMFL H3K9ac 12
BROWSER_TRACK_DESCRIPTION: BI Brain Mid Frontal Lobe Histone H3K9ac Donor 112 Library Lib:XZ:20100924:05--ChIP:XZ:20100914:05:mid frontal lobe:H3K9Ac EA Release 3
NUMBER_OF_H3K9ac_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 40
FINDPEAKS_SCORE: 0.1223
FINDPEAKS_PERCENTILE: 28
HOTSPOT_SCORE: 0.1811
HOTSPOT_PERCENTILE: 28
IROC_SCORE: 0.9871
IROC_PERCENTILE: 8
POISSON_SCORE: 0.2746
POISSON_PERCENTILE: 28
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