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Raw Signal Density Graphs of Adipose Nuclei Histone H3K4me3 ChIP-Seq Data
Illumina Histone H3K4me3 ChIP-Seq read mappings from Adipose Nuclei, Donor 95 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2011/3/18: ANALYSIS XML file 'bi.chip-seq.level.2.release.3.xml' uploaded
alias: Lib:XZ:20100731:23--ChIP:XZ:20100726:23:AdiposeNuclei:H3K4Me3.hg19.level.2.release.3
Analysis Center: EDACC Analysis File Type: .wig Analysis File Name: BI.Adipose_Nuclei.H3K4me3.95.wig DATA_ANALYSIS_LEVEL: 2 EXPERIMENT_TYPE: ChIP-Seq GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19 SOFTWARE: In house programs and scripts SOFTWARE_VERSION: NA READ_EXTENSION: 200bp TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained. GENOMIC_WINDOW: 20bp TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None RELEASE_NUMBER: Human Epigenome Atlas 3 BROWSER_TRACK_NAME: AN H3K4me3 95 BROWSER_TRACK_DESCRIPTION: BI Adipose Nuclei Histone H3K4me3 Donor 95 Library Lib:XZ:20100731:23--ChIP:XZ:20100726:23:AdiposeNuclei:H3K4Me3 EA Release 3 NUMBER_OF_H3K4me3_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 63 FINDPEAKS_SCORE: 0.503 FINDPEAKS_PERCENTILE: 68 HOTSPOT_SCORE: 0.5141 HOTSPOT_PERCENTILE: 68 IROC_SCORE: 0.9959 IROC_PERCENTILE: 36 POISSON_SCORE: 0.5483 POISSON_PERCENTILE: 68 |
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