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Raw Signal Density Graphs of Adipose Nuclei Histone H3K4me3 ChIP-Seq Data
Illumina Histone H3K4me3 ChIP-Seq read mappings from Adipose Nuclei, Donor 94 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2011/3/18:
ANALYSIS XML file 'bi.chip-seq.level.2.release.3.xml' uploaded
alias: Lib:XZ:20100731:16--ChIP:XZ:20100726:16:AdiposeNuclei:H3K4Me3.hg19.level.2.release.3
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: BI.Adipose_Nuclei.H3K4me3.94.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: ChIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained.
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 3
BROWSER_TRACK_NAME: AN H3K4me3 94
BROWSER_TRACK_DESCRIPTION: BI Adipose Nuclei Histone H3K4me3 Donor 94 Library Lib:XZ:20100731:16--ChIP:XZ:20100726:16:AdiposeNuclei:H3K4Me3 EA Release 3
NUMBER_OF_H3K4me3_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 63
FINDPEAKS_SCORE: 0.3095
FINDPEAKS_PERCENTILE: 40
HOTSPOT_SCORE: 0.3591
HOTSPOT_PERCENTILE: 40
IROC_SCORE: 0.981
IROC_PERCENTILE: 12
POISSON_SCORE: 0.4053
POISSON_PERCENTILE: 48
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: BI.Adipose_Nuclei.H3K4me3.94.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: ChIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained.
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 3
BROWSER_TRACK_NAME: AN H3K4me3 94
BROWSER_TRACK_DESCRIPTION: BI Adipose Nuclei Histone H3K4me3 Donor 94 Library Lib:XZ:20100731:16--ChIP:XZ:20100726:16:AdiposeNuclei:H3K4Me3 EA Release 3
NUMBER_OF_H3K4me3_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 63
FINDPEAKS_SCORE: 0.3095
FINDPEAKS_PERCENTILE: 40
HOTSPOT_SCORE: 0.3591
HOTSPOT_PERCENTILE: 40
IROC_SCORE: 0.981
IROC_PERCENTILE: 12
POISSON_SCORE: 0.4053
POISSON_PERCENTILE: 48
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