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Raw Signal Density Graphs of HUES64 Cell Line Histone H3K27me3 ChIP-Seq Data
Illumina Histone H3K27me3 ChIP-Seq read mappings from the HUES64 Cell Line, Library Lib:MC:20101025:04--ChIP:MC:20101020:04:ES cell HUES_64:H3K27Me3 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2011/3/18:
ANALYSIS XML file 'bi.chip-seq.level.2.release.3.xml' uploaded
alias: Lib:MC:20101025:04--ChIP:MC:20101020:04:ES cell HUES_64:H3K27Me3.hg19.level.2.release.3
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: BI.HUES64.H3K27me3.Lib_MC_20101025_04--ChIP_MC_20101020_04_ES_cell_HUES_64_H3K27Me3.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: ChIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained.
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 3
BROWSER_TRACK_NAME: HUES64 H3K27me3 e3
BROWSER_TRACK_DESCRIPTION: BI HUES64 Cell Line Histone H3K27me3 Library Lib:MC:20101025:04--ChIP:MC:20101020:04:ES cell HUES_64:H3K27Me3 EA Release 3
NUMBER_OF_H3K27me3_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 52
FINDPEAKS_SCORE: 0.4448
FINDPEAKS_PERCENTILE: 100
HOTSPOT_SCORE: 0.4804
HOTSPOT_PERCENTILE: 100
IROC_SCORE: 0.9883
IROC_PERCENTILE: 95
POISSON_SCORE: 0.5114
POISSON_PERCENTILE: 100
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: BI.HUES64.H3K27me3.Lib_MC_20101025_04--ChIP_MC_20101020_04_ES_cell_HUES_64_H3K27Me3.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: ChIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained.
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 3
BROWSER_TRACK_NAME: HUES64 H3K27me3 e3
BROWSER_TRACK_DESCRIPTION: BI HUES64 Cell Line Histone H3K27me3 Library Lib:MC:20101025:04--ChIP:MC:20101020:04:ES cell HUES_64:H3K27Me3 EA Release 3
NUMBER_OF_H3K27me3_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 52
FINDPEAKS_SCORE: 0.4448
FINDPEAKS_PERCENTILE: 100
HOTSPOT_SCORE: 0.4804
HOTSPOT_PERCENTILE: 100
IROC_SCORE: 0.9883
IROC_PERCENTILE: 95
POISSON_SCORE: 0.5114
POISSON_PERCENTILE: 100
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