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Raw Signal Density Graphs of HUES64 Cell Line Histone H3K4me1 ChIP-Seq Data
Illumina Histone H3K4me1 ChIP-Seq read mappings from the HUES64 Cell Line, Library Lib:MC:20101025:01--ChIP:MC:20101020:01:ES cell HUES_64:H3K4Me1 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2011/3/18: ANALYSIS XML file 'bi.chip-seq.level.2.release.3.xml' uploaded
alias: Lib:MC:20101025:01--ChIP:MC:20101020:01:ES cell HUES_64:H3K4Me1.hg19.level.2.release.3
Analysis Center: EDACC Analysis File Type: .wig Analysis File Name: BI.HUES64.H3K4me1.Lib_MC_20101025_01--ChIP_MC_20101020_01_ES_cell_HUES_64_H3K4Me1.wig DATA_ANALYSIS_LEVEL: 2 EXPERIMENT_TYPE: ChIP-Seq GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19 SOFTWARE: In house programs and scripts SOFTWARE_VERSION: NA READ_EXTENSION: 200bp TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained. GENOMIC_WINDOW: 20bp TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None RELEASE_NUMBER: Human Epigenome Atlas 3 BROWSER_TRACK_NAME: HUES64 H3K4me1 e1 BROWSER_TRACK_DESCRIPTION: BI HUES64 Cell Line Histone H3K4me1 Library Lib:MC:20101025:01--ChIP:MC:20101020:01:ES cell HUES_64:H3K4Me1 EA Release 3 NUMBER_OF_H3K4me1_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 50 FINDPEAKS_SCORE: 0.2689 FINDPEAKS_PERCENTILE: 39 HOTSPOT_SCORE: 0.3525 HOTSPOT_PERCENTILE: 43 IROC_SCORE: 0.9604 IROC_PERCENTILE: 36 POISSON_SCORE: 0.5135 POISSON_PERCENTILE: 50 |
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