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Raw Signal Density Graphs of Fetal Kidney Chromatin Accessibility Data
Illumina DNAse-Seq read mappings from Fetal Kidney, Donor H-23524, Library DS16139 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2011/3/17:
ANALYSIS XML file 'uw.chromatin.accessibility.level.2.release.3.xml' uploaded
alias: DS16139.hg19.level.2
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Fetal_Kidney.ChromatinAccessibility.H-23524.DS16139.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 3
BROWSER_TRACK_NAME: FK DNase 24 39
BROWSER_TRACK_DESCRIPTION: UW Fetal Kidney DNase Hypersensitivity Donor H-23524 Library DS16139 EA Release 3
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 39
FINDPEAKS_SCORE: 0.2999
FINDPEAKS_PERCENTILE: 23
HOTSPOT_SCORE: 0.3424
HOTSPOT_PERCENTILE: 36
IROC_SCORE: 0.9701
IROC_PERCENTILE: 3
POISSON_SCORE: 0.3977
POISSON_PERCENTILE: 28
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Fetal_Kidney.ChromatinAccessibility.H-23524.DS16139.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 3
BROWSER_TRACK_NAME: FK DNase 24 39
BROWSER_TRACK_DESCRIPTION: UW Fetal Kidney DNase Hypersensitivity Donor H-23524 Library DS16139 EA Release 3
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 39
FINDPEAKS_SCORE: 0.2999
FINDPEAKS_PERCENTILE: 23
HOTSPOT_SCORE: 0.3424
HOTSPOT_PERCENTILE: 36
IROC_SCORE: 0.9701
IROC_PERCENTILE: 3
POISSON_SCORE: 0.3977
POISSON_PERCENTILE: 28
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