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Raw Signal Density Graphs of Fetal Thymus Chromatin Accessibility Data
Illumina DNAse-Seq read mappings from Fetal Thymus, Donor H-23589, Library DS16490 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2011/3/17:
ANALYSIS XML file 'uw.chromatin.accessibility.level.2.release.3.xml' uploaded
alias: DS16490.hg19.level.2
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Fetal_Thymus.ChromatinAccessibility.H-23589.DS16490.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 3
BROWSER_TRACK_NAME: FT DNase 89 90
BROWSER_TRACK_DESCRIPTION: UW Fetal Thymus DNase Hypersensitivity Donor H-23589 Library DS16490 EA Release 3
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 39
FINDPEAKS_SCORE: 0.304
FINDPEAKS_PERCENTILE: 26
HOTSPOT_SCORE: 0.301
HOTSPOT_PERCENTILE: 15
IROC_SCORE: 0.9963
IROC_PERCENTILE: 82
POISSON_SCORE: 0.3506
POISSON_PERCENTILE: 8
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Fetal_Thymus.ChromatinAccessibility.H-23589.DS16490.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 3
BROWSER_TRACK_NAME: FT DNase 89 90
BROWSER_TRACK_DESCRIPTION: UW Fetal Thymus DNase Hypersensitivity Donor H-23589 Library DS16490 EA Release 3
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 39
FINDPEAKS_SCORE: 0.304
FINDPEAKS_PERCENTILE: 26
HOTSPOT_SCORE: 0.301
HOTSPOT_PERCENTILE: 15
IROC_SCORE: 0.9963
IROC_PERCENTILE: 82
POISSON_SCORE: 0.3506
POISSON_PERCENTILE: 8
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