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Raw Signal Density Graphs of Fetal Brain Chromatin Accessibility Data
Illumina DNAse-Seq read mappings from Fetal Brain, Donor H-23399, Library DS15453 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2011/3/17:
ANALYSIS XML file 'uw.chromatin.accessibility.level.2.release.3.xml' uploaded
alias: DS15453.hg19.level.2
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Fetal_Brain.ChromatinAccessibility.H-23399.DS15453.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 3
BROWSER_TRACK_NAME: FB DNase 99 53
BROWSER_TRACK_DESCRIPTION: UW Fetal Brain DNase Hypersensitivity Donor H-23399 Library DS15453 EA Release 3
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 39
FINDPEAKS_SCORE: 0.3342
FINDPEAKS_PERCENTILE: 36
HOTSPOT_SCORE: 0.3261
HOTSPOT_PERCENTILE: 31
IROC_SCORE: 0.9913
IROC_PERCENTILE: 23
POISSON_SCORE: 0.4304
POISSON_PERCENTILE: 41
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Fetal_Brain.ChromatinAccessibility.H-23399.DS15453.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 3
BROWSER_TRACK_NAME: FB DNase 99 53
BROWSER_TRACK_DESCRIPTION: UW Fetal Brain DNase Hypersensitivity Donor H-23399 Library DS15453 EA Release 3
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 39
FINDPEAKS_SCORE: 0.3342
FINDPEAKS_PERCENTILE: 36
HOTSPOT_SCORE: 0.3261
HOTSPOT_PERCENTILE: 31
IROC_SCORE: 0.9913
IROC_PERCENTILE: 23
POISSON_SCORE: 0.4304
POISSON_PERCENTILE: 41
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