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Raw Signal Density Graphs of CD4 Memory Primary Cells MRE-Seq Data
Illumina MRE-Seq read mappings from CD4 Memory Primary Cells, Donor TC009 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2011/3/16:
ANALYSIS XML file 'ucsf-ubc.mre.level.2.release.3.xml' uploaded
alias: HS2748-1.hg19.level.2
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UCSF-UBC.CD4_Memory_Primary_Cells.MRE-Seq.TC009.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: MRE-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 3
BROWSER_TRACK_NAME: CD4M MRE 09
BROWSER_TRACK_DESCRIPTION: UCSF-UBC-USC CD4 Memory Primary Cells MRE-Seq Donor TC009 Library HS2748-1 EA Release 3
NUMBER_OF_MRE-SEQ_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 7
PERCENT_READS_MAPPING_TO_RESTRICTION_FRAGMENTS: 99.57
PERCENT_READS_MAPPING_TO_RESTRICTION_FRAGMENTS_PERCENTILE: 14
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UCSF-UBC.CD4_Memory_Primary_Cells.MRE-Seq.TC009.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: MRE-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 3
BROWSER_TRACK_NAME: CD4M MRE 09
BROWSER_TRACK_DESCRIPTION: UCSF-UBC-USC CD4 Memory Primary Cells MRE-Seq Donor TC009 Library HS2748-1 EA Release 3
NUMBER_OF_MRE-SEQ_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 7
PERCENT_READS_MAPPING_TO_RESTRICTION_FRAGMENTS: 99.57
PERCENT_READS_MAPPING_TO_RESTRICTION_FRAGMENTS_PERCENTILE: 14
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