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Raw Signal Density Graphs of Neurosphere Cultured Cells Ganglionic Eminence Derived MRE-Seq Data
Illumina MRE-Seq read mappings from Neurosphere Cultured Cells Ganglionic Eminence Derived, Donor HuFNSC01 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2011/3/16:
ANALYSIS XML file 'ucsf-ubc.mre.level.2.release.3.xml' uploaded
alias: HS2776-1.hg19.level.2
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UCSF-UBC.Neurosphere_Cultured_Cells_Ganglionic_Eminence_Derived.MRE-Seq.HuFNSC01.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: MRE-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 3
BROWSER_TRACK_NAME: NGED MRE 01
BROWSER_TRACK_DESCRIPTION: UCSF-UBC-USC Neurosphere Cultured Cells Ganglionic Eminence Derived MRE-Seq Donor HuFNSC01 Library HS2776-1 EA Release 3
NUMBER_OF_MRE-SEQ_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 7
PERCENT_READS_MAPPING_TO_RESTRICTION_FRAGMENTS: 99.71
PERCENT_READS_MAPPING_TO_RESTRICTION_FRAGMENTS_PERCENTILE: 57
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UCSF-UBC.Neurosphere_Cultured_Cells_Ganglionic_Eminence_Derived.MRE-Seq.HuFNSC01.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: MRE-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 3
BROWSER_TRACK_NAME: NGED MRE 01
BROWSER_TRACK_DESCRIPTION: UCSF-UBC-USC Neurosphere Cultured Cells Ganglionic Eminence Derived MRE-Seq Donor HuFNSC01 Library HS2776-1 EA Release 3
NUMBER_OF_MRE-SEQ_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 7
PERCENT_READS_MAPPING_TO_RESTRICTION_FRAGMENTS: 99.71
PERCENT_READS_MAPPING_TO_RESTRICTION_FRAGMENTS_PERCENTILE: 57
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