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Raw Signal Density Graphs of Breast Luminal Epithelial Cells mRNA-Seq Data
Illumina mRNA-Seq read mappings from Breast Luminal Epithelial Cells, Donor RM080 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2011/3/16:
ANALYSIS XML file 'ucsf-ubc.mrna-seq.level.2.release.3.xml' uploaded
alias: A01029-1.hg19.level.2.release.3
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UCSF-UBC.Breast_Luminal_Epithelial_Cells.mRNA-Seq.RM080.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: mRNA-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 3
BROWSER_TRACK_NAME: BLEC mRNA 80
BROWSER_TRACK_DESCRIPTION: UCSF-UBC-USC Breast Luminal Epithelial Cells mRNA-Seq Donor RM080 Library A01029-1 EA Release 3
NUMBER_OF_MRNA-SEQ_EXPERIMENTS_SCORED: 7
PERCENT_READS_MAPPING_TO_UCSC_GENES: 92.6
PERCENT_READS_MAPPING_TO_UCSC_GENES_PERCENTILE: 43
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UCSF-UBC.Breast_Luminal_Epithelial_Cells.mRNA-Seq.RM080.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: mRNA-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 3
BROWSER_TRACK_NAME: BLEC mRNA 80
BROWSER_TRACK_DESCRIPTION: UCSF-UBC-USC Breast Luminal Epithelial Cells mRNA-Seq Donor RM080 Library A01029-1 EA Release 3
NUMBER_OF_MRNA-SEQ_EXPERIMENTS_SCORED: 7
PERCENT_READS_MAPPING_TO_UCSC_GENES: 92.6
PERCENT_READS_MAPPING_TO_UCSC_GENES_PERCENTILE: 43
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