|
|
| Home | Browser | Tools | Log Out |
Help
|
Raw Signal Density Graphs of CD4 Memory Primary Cells mRNA-Seq Data
Illumina mRNA-Seq read mappings from CD4 Memory Primary Cells, Donor TC014 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2011/3/16:
ANALYSIS XML file 'ucsf-ubc.mrna-seq.level.2.release.3.xml' uploaded
alias: A01027-1.hg19.level.2.release.3
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UCSF-UBC.CD4_Memory_Primary_Cells.mRNA-Seq.TC014.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: mRNA-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 3
BROWSER_TRACK_NAME: CD4M mRNA 14
BROWSER_TRACK_DESCRIPTION: UCSF-UBC-USC CD4 Memory Primary Cells mRNA-Seq Donor TC014 Library A01027-1 EA Release 3
NUMBER_OF_MRNA-SEQ_EXPERIMENTS_SCORED: 7
PERCENT_READS_MAPPING_TO_UCSC_GENES: 93.9
PERCENT_READS_MAPPING_TO_UCSC_GENES_PERCENTILE: 100
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UCSF-UBC.CD4_Memory_Primary_Cells.mRNA-Seq.TC014.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: mRNA-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 3
BROWSER_TRACK_NAME: CD4M mRNA 14
BROWSER_TRACK_DESCRIPTION: UCSF-UBC-USC CD4 Memory Primary Cells mRNA-Seq Donor TC014 Library A01027-1 EA Release 3
NUMBER_OF_MRNA-SEQ_EXPERIMENTS_SCORED: 7
PERCENT_READS_MAPPING_TO_UCSC_GENES: 93.9
PERCENT_READS_MAPPING_TO_UCSC_GENES_PERCENTILE: 100
|
Genboree is built & maintained by the Bioinformatics Research Laboratory
at Baylor College of Medicine.
Genboree is a hosted service. Code is available
free for academic use.
|
|
|
© 2001-2013 Bioinformatics Research Laboratory
(400D Jewish Wing, MS:BCM225, 1 Baylor Plaza, Houston, TX 77030, 713-798-5433) |
|