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Raw Signal Density Graphs of Adipose Derived Mesenchymal Stem Cell Cultured Cells Histone H3K9ac ChIP-Seq Data
Illumina Histone H3K9ac ChIP-Seq read mappings from Adipose Derived Mesenchymal Stem Cell Cultured Cells, Donor 1 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2010/11/2:
ANALYSIS XML file 'bi.chip-seq.level.2.xml' uploaded
alias: Lib:XZ:20100107:06--ChIP:XZ:20100104:04:ADMSC:H3K9Ac.hg19.level.2
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: BI.Adipose_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K9ac.1.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: ChIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained.
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 2
BROWSER_TRACK_NAME: ADMSC H3K9ac 1
BROWSER_TRACK_DESCRIPTION: BI Adipose Derived Mesenchymal Stem Cell Cultured Cells Histone H3K9ac Donor 1 EA Release 2
NUMBER_OF_H3K9ac_EXPERIMENTS_SCORED: 24
FINDPEAKS_SCORE: 0.4059
FINDPEAKS_PERCENTILE: 74
HOTSPOT_SCORE: 0.395
HOTSPOT_PERCENTILE: 71
IROC_SCORE: 0.994
IROC_PERCENTILE: 71
POISSON_SCORE: 0.5558
POISSON_PERCENTILE: 74
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: BI.Adipose_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K9ac.1.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: ChIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained.
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 2
BROWSER_TRACK_NAME: ADMSC H3K9ac 1
BROWSER_TRACK_DESCRIPTION: BI Adipose Derived Mesenchymal Stem Cell Cultured Cells Histone H3K9ac Donor 1 EA Release 2
NUMBER_OF_H3K9ac_EXPERIMENTS_SCORED: 24
FINDPEAKS_SCORE: 0.4059
FINDPEAKS_PERCENTILE: 74
HOTSPOT_SCORE: 0.395
HOTSPOT_PERCENTILE: 71
IROC_SCORE: 0.994
IROC_PERCENTILE: 71
POISSON_SCORE: 0.5558
POISSON_PERCENTILE: 74
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