|
|
| Home | Browser | Tools | Log Out |
Help
|
Genboree Home |
Raw Signal Density Graphs of H1 Cell Line ChIP-Seq Input Data
Illumina ChIP-Seq Input read mappings from the H1 Cell Line, Library Solexa-10531 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2010/11/2:
ANALYSIS XML file 'bi.chip-seq.level.2.xml' uploaded
alias: 314G6AAXX090406-5-S.hg19.level.2
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: BI.H1.Input.Solexa-10531.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: ChIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained.
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 2
BROWSER_TRACK_NAME: H1 Input 31
BROWSER_TRACK_DESCRIPTION: BI H1 Cell Line ChIP-Seq Input Library Solexa-10531 EA Release 2
NUMBER_OF_Input_EXPERIMENTS_SCORED: 40
FINDPEAKS_SCORE: 0.0094
FINDPEAKS_PERCENTILE: 48
HOTSPOT_SCORE: 0.0894
HOTSPOT_PERCENTILE: 73
IROC_SCORE: 0.3785
IROC_PERCENTILE: 27
POISSON_SCORE: 0.1752
POISSON_PERCENTILE: 13
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: BI.H1.Input.Solexa-10531.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: ChIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained.
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 2
BROWSER_TRACK_NAME: H1 Input 31
BROWSER_TRACK_DESCRIPTION: BI H1 Cell Line ChIP-Seq Input Library Solexa-10531 EA Release 2
NUMBER_OF_Input_EXPERIMENTS_SCORED: 40
FINDPEAKS_SCORE: 0.0094
FINDPEAKS_PERCENTILE: 48
HOTSPOT_SCORE: 0.0894
HOTSPOT_PERCENTILE: 73
IROC_SCORE: 0.3785
IROC_PERCENTILE: 27
POISSON_SCORE: 0.1752
POISSON_PERCENTILE: 13
|
© 2001-2024 Baylor College of Medicine
Bioinformatics Research Laboratory (400D Jewish Wing, MS:BCM225, 1 Baylor Plaza, Houston, TX 77030) |