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Raw Signal Density Graphs of H9 Cell Line Histone H3K36me3 ChIP-Seq Data
Illumina Histone H3K36me3 ChIP-Seq read mappings from the H9 Cell Line, Library SK102 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2010/11/1: ANALYSIS XML file 'ucsd.chip-seq.level.2.xml' uploaded
alias: renlab.H3K36me3.hESC.H9.01.01.hg19.level.2
Analysis Center: EDACC Analysis File Type: .wig Analysis File Name: UCSD.H9.H3K36me3.SK102.wig DATA_ANALYSIS_LEVEL: 2 EXPERIMENT_TYPE: ChIP-Seq GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19 SOFTWARE: In house programs and scripts SOFTWARE_VERSION: NA READ_EXTENSION: 200bp TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained. GENOMIC_WINDOW: 20bp TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None RELEASE_NUMBER: Human Epigenome Atlas 2 BROWSER_TRACK_NAME: H9 H3K36me3 02 BROWSER_TRACK_DESCRIPTION: UCSD H9 Cell Line Histone H3K36me3 Library SK102 EA Release 2 NUMBER_OF_H3K36me3_EXPERIMENTS_SCORED: 54 FINDPEAKS_SCORE: 0.3733 FINDPEAKS_PERCENTILE: 76 HOTSPOT_SCORE: 0.3335 HOTSPOT_PERCENTILE: 77 IROC_SCORE: 0.9915 IROC_PERCENTILE: 85 POISSON_SCORE: 0.4816 POISSON_PERCENTILE: 43 |
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