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Raw Signal Density Graphs of H1 Cell Line Histone H3K36me3 ChIP-Seq Data
Illumina Histone H3K36me3 ChIP-Seq read mappings from the H1 Cell Line, Library H1EScd1-me3K36-A were processed into density graphs of raw signal representing the aligned read density.
Project News:
2010/11/1: ANALYSIS XML file 'ucsf-ubc.chip-seq.level.2.xml' uploaded
alias: HS1032-1_30WLMAAXX-HS1032-1_305H8AAXX.hg19.level.2
Analysis Center: EDACC Analysis File Type: .wig Analysis File Name: UCSF-UBC.H1.H3K36me3.H1EScd1-me3K36-A.wig DATA_ANALYSIS_LEVEL: 2 EXPERIMENT_TYPE: ChIP-Seq GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19 SOFTWARE: In house programs and scripts SOFTWARE_VERSION: NA READ_EXTENSION: 200bp TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained. GENOMIC_WINDOW: 20bp TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None RELEASE_NUMBER: Human Epigenome Atlas 2 BROWSER_TRACK_NAME: H1 H3K36me3 A BROWSER_TRACK_DESCRIPTION: UCSF-UBC-UCD H1 Cell Line Histone H3K36me3 Library H1EScd1-me3K36-A EA Release 2 NUMBER_OF_H3K36me3_EXPERIMENTS_SCORED: 54 FINDPEAKS_SCORE: 0.2095 FINDPEAKS_PERCENTILE: 41 HOTSPOT_SCORE: 0.245 HOTSPOT_PERCENTILE: 45 IROC_SCORE: 0.9602 IROC_PERCENTILE: 46 POISSON_SCORE: 0.4109 POISSON_PERCENTILE: 22 |
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