|
|||||||||
Raw Signal Density Graphs of H1 Cell Line Histone H3K9me3 ChIP-Seq Data
Illumina Histone H3K9me3 ChIP-Seq read mappings from the H1 Cell Line, Library H1EScd1-me3K9-A were processed into density graphs of raw signal representing the aligned read density.
Project News:
2010/11/1: ANALYSIS XML file 'ucsf-ubc.chip-seq.level.2.xml' uploaded
alias: HS0998-1_30WLLAAXX-HS0998-1_305Y8AAXX-HS0998-1_313MWAAXX-HS0998-1_3061PAAXX.hg19.level.2
Analysis Center: EDACC Analysis File Type: .wig Analysis File Name: UCSF-UBC.H1.H3K9me3.H1EScd1-me3K9-A.wig DATA_ANALYSIS_LEVEL: 2 EXPERIMENT_TYPE: ChIP-Seq GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19 SOFTWARE: In house programs and scripts SOFTWARE_VERSION: NA READ_EXTENSION: 200bp TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained. GENOMIC_WINDOW: 20bp TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None RELEASE_NUMBER: Human Epigenome Atlas 2 BROWSER_TRACK_NAME: H1 H3K9me3 A BROWSER_TRACK_DESCRIPTION: UCSF-UBC-UCD H1 Cell Line Histone H3K9me3 Library H1EScd1-me3K9-A EA Release 2 NUMBER_OF_H3K9me3_EXPERIMENTS_SCORED: 59 FINDPEAKS_SCORE: 0.2638 FINDPEAKS_PERCENTILE: 88 HOTSPOT_SCORE: 0.2167 HOTSPOT_PERCENTILE: 73 IROC_SCORE: 0.9721 IROC_PERCENTILE: 92 POISSON_SCORE: 0.4156 POISSON_PERCENTILE: 61 |
|||||||||
|
|||||||||