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Raw Signal Density Graphs of Breast Luminal Epithelial Cells MeDIP-Seq Data
Illumina MeDIP-Seq read mappings from Breast Luminal Epithelial Cells, Donor RM037 were processed into density graphs of raw signal representing the aligned read density.


Project News:
2010/10/26:
ANALYSIS XML file 'ucsf-ubc.medip.level.2.xml' uploaded



alias: HS2380-1_61Y7EAAXX-HS2380-1_61YUCAAXX.hg19.level.2
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UCSF-UBC.Breast_Luminal_Epithelial_Cells.MeDIP-Seq.RM037.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: MeDIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 2
BROWSER_TRACK_NAME: BLEC MeDIP 37
BROWSER_TRACK_DESCRIPTION: UCSF-UBC-UCD Breast Luminal Epithelial Cells MeDIP-Seq Donor RM037 EA Release 2
NUMBER_OF_MEDIP-SEQ_EXPERIMENTS_SCORED: 24
FINDPEAKS_SCORE: 0.0896
FINDPEAKS_PERCENTILE: 12
HOTSPOT_SCORE: 0.2494
HOTSPOT_PERCENTILE: 16
IROC_SCORE: 0.8818
IROC_PERCENTILE: 20
POISSON_SCORE: 0.7083
POISSON_PERCENTILE: 75

 

 


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