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Raw Signal Density Graphs of CD4 Memory Primary Cells MeDIP-Seq Data
Illumina MeDIP-Seq read mappings from CD4 Memory Primary Cells, Donor TC003 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2010/10/26: ANALYSIS XML file 'ucsf-ubc.medip.level.2.xml' uploaded
alias: HS2379-1_61Y7EAAXX-HS2379-1_624UKAAXX-HS2379-1_61WRCAAXX.hg19.level.2
Analysis Center: EDACC Analysis File Type: .wig Analysis File Name: UCSF-UBC.CD4_Memory_Primary_Cells.MeDIP-Seq.TC003.wig DATA_ANALYSIS_LEVEL: 2 EXPERIMENT_TYPE: MeDIP-Seq GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19 SOFTWARE: In house programs and scripts SOFTWARE_VERSION: NA READ_EXTENSION: 200bp GENOMIC_WINDOW: 20bp TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None RELEASE_NUMBER: Human Epigenome Atlas 2 BROWSER_TRACK_NAME: CD4M MeDIP 03 BROWSER_TRACK_DESCRIPTION: UCSF-UBC-UCD CD4 Memory Primary Cells MeDIP-Seq Donor TC003 EA Release 2 NUMBER_OF_MEDIP-SEQ_EXPERIMENTS_SCORED: 24 FINDPEAKS_SCORE: 0.2341 FINDPEAKS_PERCENTILE: 41 HOTSPOT_SCORE: 0.201 HOTSPOT_PERCENTILE: 12 IROC_SCORE: 0.8373 IROC_PERCENTILE: 16 POISSON_SCORE: 0.6486 POISSON_PERCENTILE: 16 |
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