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Raw Signal Density Graphs of IMR90 Cell Line Chromatin Accessibility Data
Illumina DNAse-Seq read mappings from the IMR90 Cell Line, Library DS11759 were processed into density graphs of raw signal representing the aligned read density.

Project News:
2010/10/22:
ANALYSIS XML file 'uw.chromatinAccessibility.level2.release2.xml' uploaded


alias: DS11759.hg19.level.2
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.IMR90.ChromatinAccessibility.DS11759.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 2
BROWSER_TRACK_NAME: IMR90 DNase 59 59
BROWSER_TRACK_DESCRIPTION: UW IMR90 Cell Line DNase Hypersensitivity Library DS11759 EA Release 2
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED: 40
FINDPEAKS_SCORE: 0.3846
FINDPEAKS_PERCENTILE: 5
HOTSPOT_SCORE: 0.2914
HOTSPOT_PERCENTILE: 5
IROC_SCORE: 0.9966
IROC_PERCENTILE: 37
POISSON_SCORE: 0.3873
POISSON_PERCENTILE: 10

 

 

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