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Raw Signal Density Graphs of CD19 Primary Cells Input ChIP-Seq Data
Illumina Input ChIP-Seq read mappings from CD19 Primary Cells, Donor CD19_0/0/00, were processed into density graphs of raw signal representing the aligned read density.
Project News:
2013/7/15:
ANALYSIS XML file 'bi.chip-seq.level.2.xml' uploaded
alias: Lib EpiLabSPL Row 1819.hg19.level.2.release.9
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: BI.CD19_Primary_Cells.Input.CD19_0_0_00.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: ChIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained.
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 9
BROWSER_TRACK_NAME: CD19 Input 0 19
BROWSER_TRACK_DESCRIPTION: BI CD19 Primary Cells ChIP-Seq Input Donor CD19_0/0/00 Library Lib EpiLabSPL Row 1819 EA Release 9
NUMBER_OF_MAPPED_READS: 38,284,082
FINDPEAKS_SCORE: 0.005
FINDPEAKS_PERCENTILE: 27
HOTSPOT_SCORE: 0.0032
HOTSPOT_PERCENTILE: 16
IROC_SCORE: 1.0
IROC_PERCENTILE: 100
POISSON_SCORE: 0.0181
POISSON_PERCENTILE: 6
MAXIMUM_REPLICATE_CORRELATION: 0.97
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: BI.CD19_Primary_Cells.Input.CD19_0_0_00.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: ChIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained.
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 9
BROWSER_TRACK_NAME: CD19 Input 0 19
BROWSER_TRACK_DESCRIPTION: BI CD19 Primary Cells ChIP-Seq Input Donor CD19_0/0/00 Library Lib EpiLabSPL Row 1819 EA Release 9
NUMBER_OF_MAPPED_READS: 38,284,082
FINDPEAKS_SCORE: 0.005
FINDPEAKS_PERCENTILE: 27
HOTSPOT_SCORE: 0.0032
HOTSPOT_PERCENTILE: 16
IROC_SCORE: 1.0
IROC_PERCENTILE: 100
POISSON_SCORE: 0.0181
POISSON_PERCENTILE: 6
MAXIMUM_REPLICATE_CORRELATION: 0.97
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