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Mapping of hESC Derived CD184+ Endoderm Cultured Cells H3K27ac ChIP-Seq Data
Illumina reads produced by H3K27ac ChIP-Seq on the hESC Derived CD184+ Endoderm Cultured Cells, Library DNA_Lib 3189, were mapped to the human genome using Pash.
Project News:
2013/7/15: ANALYSIS XML file 'bi.chip-seq.level.1.xml' uploaded
alias: DNA_Lib 3189.hg19.level.1.release.9
Analysis Center: EDACC Analysis File Type: .bed Analysis File Name: BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.H3K27ac.DNA_Lib_3189.bed DATA_ANALYSIS_LEVEL: 1 EXPERIMENT_TYPE: ChIP-Seq GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19 SOFTWARE: Pash SOFTWARE_VERSION: 3.0 MAXIMUM_ALIGNMENT_LENGTH: Read length MISMATCHES_ALLOWED: 10% of read length ALIGNMENTS_ALLOWED: 1 TREATMENT_OF_MULTIPLE_ALIGNMENTS: If a read maps to more than 1 position it is removed from consideration. TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained. ALIGNMENT_POSTPROCESSING: None READ_EXTENSION: 200bp RELEASE_NUMBER: Human Epigenome Atlas 9 NUMBER_OF_MAPPED_READS: 17,628,829 FINDPEAKS_SCORE: 0.1242 FINDPEAKS_PERCENTILE: 9 HOTSPOT_SCORE: 0.0 HOTSPOT_PERCENTILE: 6 IROC_SCORE: 0.973 IROC_PERCENTILE: 15 POISSON_SCORE: 0.3342 POISSON_PERCENTILE: 19 MAXIMUM_REPLICATE_CORRELATION: 0.33 |
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