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Raw Signal Density Graphs of CD3 Primary Cells Input ChIP-Seq Data
Illumina Input ChIP-Seq read mappings from CD3 Primary Cells, Donor RO 01701, were processed into density graphs of raw signal representing the aligned read density.
Project News:
2013/6/13: ANALYSIS XML file 'uw.chip-seq.level.2.xml' uploaded
alias: Histone.DS21626-Histone.DS21626.hg19.level.2.release.9
Analysis Center: EDACC Analysis File Type: .wig Analysis File Name: UW.CD3_Primary_Cells.Input.RO_01701.Histone.DS21626.wig DATA_ANALYSIS_LEVEL: 2 EXPERIMENT_TYPE: ChIP-Seq GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19 SOFTWARE: In house programs and scripts SOFTWARE_VERSION: NA READ_EXTENSION: 200bp TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained. GENOMIC_WINDOW: 20bp TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None RELEASE_NUMBER: Human Epigenome Atlas 9 BROWSER_TRACK_NAME: CD3 Input 01 26 BROWSER_TRACK_DESCRIPTION: UW CD3 Primary Cells ChIP-Seq Input Donor RO 01701 Library Histone.DS21626 EA Release 9 NUMBER_OF_MAPPED_READS: 36,315,122 FINDPEAKS_SCORE: 0.0054 FINDPEAKS_PERCENTILE: 37 HOTSPOT_SCORE: 0.0035 HOTSPOT_PERCENTILE: 20 IROC_SCORE: 1.0 IROC_PERCENTILE: 100 POISSON_SCORE: 0.0247 POISSON_PERCENTILE: 14 MAXIMUM_REPLICATE_CORRELATION: 0.97 |
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