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Raw Signal Density Graphs of Fetal Muscle Trunk Input ChIP-Seq Data
Illumina Input ChIP-Seq read mappings from Fetal Muscle Trunk, Donor H-24854, were processed into density graphs of raw signal representing the aligned read density.
Project News:
2013/6/13:
ANALYSIS XML file 'uw.chip-seq.level.2.xml' uploaded
alias: Histone.DS23031-Histone.DS23031-Histone.DS23031.hg19.level.2.release.9
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Fetal_Muscle_Trunk.Input.H-24854.Histone.DS23031.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: ChIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained.
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 9
BROWSER_TRACK_NAME: FMT Input 54 31
BROWSER_TRACK_DESCRIPTION: UW Fetal Muscle Trunk ChIP-Seq Input Donor H-24854 Library Histone.DS23031 EA Release 9
NUMBER_OF_MAPPED_READS: 25,760,287
FINDPEAKS_SCORE: 0.0062
FINDPEAKS_PERCENTILE: 63
HOTSPOT_SCORE: 0.0329
HOTSPOT_PERCENTILE: 66
IROC_SCORE: 0.873
IROC_PERCENTILE: 43
POISSON_SCORE: 0.051
POISSON_PERCENTILE: 48
MAXIMUM_REPLICATE_CORRELATION: NA
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Fetal_Muscle_Trunk.Input.H-24854.Histone.DS23031.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: ChIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained.
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 9
BROWSER_TRACK_NAME: FMT Input 54 31
BROWSER_TRACK_DESCRIPTION: UW Fetal Muscle Trunk ChIP-Seq Input Donor H-24854 Library Histone.DS23031 EA Release 9
NUMBER_OF_MAPPED_READS: 25,760,287
FINDPEAKS_SCORE: 0.0062
FINDPEAKS_PERCENTILE: 63
HOTSPOT_SCORE: 0.0329
HOTSPOT_PERCENTILE: 66
IROC_SCORE: 0.873
IROC_PERCENTILE: 43
POISSON_SCORE: 0.051
POISSON_PERCENTILE: 48
MAXIMUM_REPLICATE_CORRELATION: NA
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