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Raw Signal Density Graphs of Penis Foreskin Melanocyte Primary Cells MRE-Seq Data
Illumina MRE-Seq read mappings from Penis Foreskin Melanocyte Primary Cells, Donor skin03 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2012/9/6:
ANALYSIS XML file 'ucsf-ubc.mre.level.2.xml' uploaded
alias: A13915-1.hg19.level.2.release.8
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.MRE-Seq.skin03.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: MRE-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 8
BROWSER_TRACK_NAME: PFM MRE 03 15
BROWSER_TRACK_DESCRIPTION: UCSF-UBC-USC Penis Foreskin Melanocyte Primary Cells MRE-Seq Donor skin03 Library A13915 EA Release 8
NUMBER_OF_MAPPED_READS: 15,738,118
NUMBER_OF_MRE-SEQ_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 3
PERCENT_READS_MAPPING_TO_RESTRICTION_FRAGMENTS: 9623.0
PERCENT_READS_MAPPING_TO_RESTRICTION_FRAGMENTS_PERCENTILE: 33
MAXIMUM_REPLICATE_CORRELATION: 0.55
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.MRE-Seq.skin03.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: MRE-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 8
BROWSER_TRACK_NAME: PFM MRE 03 15
BROWSER_TRACK_DESCRIPTION: UCSF-UBC-USC Penis Foreskin Melanocyte Primary Cells MRE-Seq Donor skin03 Library A13915 EA Release 8
NUMBER_OF_MAPPED_READS: 15,738,118
NUMBER_OF_MRE-SEQ_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 3
PERCENT_READS_MAPPING_TO_RESTRICTION_FRAGMENTS: 9623.0
PERCENT_READS_MAPPING_TO_RESTRICTION_FRAGMENTS_PERCENTILE: 33
MAXIMUM_REPLICATE_CORRELATION: 0.55
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