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Raw Signal Density Graphs of Adrenal Gland Input ChIP-Seq Data
Illumina Input ChIP-Seq read mappings from Adrenal Gland, Donor STL003, were processed into density graphs of raw signal representing the aligned read density.
Project News:
2012/7/9: ANALYSIS XML file 'ucsd.chip-seq.level.2.xml' uploaded
alias: renlab.Input.STL003AD.01.01.hg19.level.2.release.8
Analysis Center: EDACC Analysis File Type: .wig Analysis File Name: UCSD.Adrenal_Gland.Input.STL003.wig DATA_ANALYSIS_LEVEL: 2 EXPERIMENT_TYPE: ChIP-Seq GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19 SOFTWARE: In house programs and scripts SOFTWARE_VERSION: NA READ_EXTENSION: 200bp TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained. GENOMIC_WINDOW: 20bp TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None RELEASE_NUMBER: Human Epigenome Atlas 8 BROWSER_TRACK_NAME: AG Input 03 23 BROWSER_TRACK_DESCRIPTION: UCSD Adrenal Gland ChIP-Seq Input Donor STL003 Library AK323 EA Release 8 NUMBER_OF_MAPPED_READS: 34,898,051 NUMBER_OF_Input_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 19 FINDPEAKS_SCORE: 0.0068 FINDPEAKS_PERCENTILE: 47 HOTSPOT_SCORE: 0.0328 HOTSPOT_PERCENTILE: 37 IROC_SCORE: NA IROC_PERCENTILE: NA POISSON_SCORE: 0.199 POISSON_PERCENTILE: 58 MAXIMUM_REPLICATE_CORRELATION: NA |
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