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Raw Signal Density Graphs of Adipose Nuclei H3K27ac ChIP-Seq Data
Illumina H3K27ac ChIP-Seq read mappings from Adipose Nuclei, Donor 7, were processed into density graphs of raw signal representing the aligned read density.
Project News:
2012/7/5:
ANALYSIS XML file 'bi.chip-seq.level.2.xml' uploaded
alias: DNA_Lib 1764-DNA_Lib 1764.hg19.level.2.release.6
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: BI.Adipose_Nuclei.H3K27ac.7.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: ChIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained.
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 8
BROWSER_TRACK_NAME: AN H3K27ac 7 64
BROWSER_TRACK_DESCRIPTION: BI Adipose Nuclei Histone H3K27ac Donor 7 Library DNA_Lib 1764 EA Release 8
NUMBER_OF_MAPPED_READS: 16,591,902
NUMBER_OF_H3K27ac_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 21
FINDPEAKS_SCORE: 0.4468
FINDPEAKS_PERCENTILE: 48
HOTSPOT_SCORE: 0.4746
HOTSPOT_PERCENTILE: 48
IROC_SCORE: 0.9976
IROC_PERCENTILE: 67
POISSON_SCORE: 0.5425
POISSON_PERCENTILE: 57
MAXIMUM_REPLICATE_CORRELATION: 0.0
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: BI.Adipose_Nuclei.H3K27ac.7.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: ChIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained.
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 8
BROWSER_TRACK_NAME: AN H3K27ac 7 64
BROWSER_TRACK_DESCRIPTION: BI Adipose Nuclei Histone H3K27ac Donor 7 Library DNA_Lib 1764 EA Release 8
NUMBER_OF_MAPPED_READS: 16,591,902
NUMBER_OF_H3K27ac_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 21
FINDPEAKS_SCORE: 0.4468
FINDPEAKS_PERCENTILE: 48
HOTSPOT_SCORE: 0.4746
HOTSPOT_PERCENTILE: 48
IROC_SCORE: 0.9976
IROC_PERCENTILE: 67
POISSON_SCORE: 0.5425
POISSON_PERCENTILE: 57
MAXIMUM_REPLICATE_CORRELATION: 0.0
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