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Raw Signal Density Graphs of H1 Derived Neuronal Progenitor Cultured Cells ChromatinAccessibility Data
Illumina DNAse-Seq read mappings from the H1 Derived Neuronal Progenitor Cultured Cells, Library DS20153 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2012/7/2:
ANALYSIS XML file 'uw.chromatin.accessibility.level.2.xml' uploaded
alias: DS20153.hg19.level.2.release.8
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.H1_Derived_Neuronal_Progenitor_Cultured_Cells.ChromatinAccessibility.DS20153.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 8
BROWSER_TRACK_NAME: HDNP DNase 53
BROWSER_TRACK_DESCRIPTION: UW H1 Derived Neuronal Progenitor Cultured Cells DNase Hypersensitivity Library DS20153 EA Release 8
NUMBER_OF_MAPPED_READS: 45,984,280
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 3
FINDPEAKS_SCORE: 0.2487
FINDPEAKS_PERCENTILE: 33
HOTSPOT_SCORE: 0.2482
HOTSPOT_PERCENTILE: 33
IROC_SCORE: 0.996
IROC_PERCENTILE: 67
POISSON_SCORE: 0.3223
POISSON_PERCENTILE: 33
MAXIMUM_REPLICATE_CORRELATION: 0.98
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.H1_Derived_Neuronal_Progenitor_Cultured_Cells.ChromatinAccessibility.DS20153.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 8
BROWSER_TRACK_NAME: HDNP DNase 53
BROWSER_TRACK_DESCRIPTION: UW H1 Derived Neuronal Progenitor Cultured Cells DNase Hypersensitivity Library DS20153 EA Release 8
NUMBER_OF_MAPPED_READS: 45,984,280
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 3
FINDPEAKS_SCORE: 0.2487
FINDPEAKS_PERCENTILE: 33
HOTSPOT_SCORE: 0.2482
HOTSPOT_PERCENTILE: 33
IROC_SCORE: 0.996
IROC_PERCENTILE: 67
POISSON_SCORE: 0.3223
POISSON_PERCENTILE: 33
MAXIMUM_REPLICATE_CORRELATION: 0.98
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