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Raw Signal Density Graphs of H1 Derived Mesenchymal Stem Cells Digital Genomic Footprinting Data
Illumina Digital Genomic Footprinting read mappings from H1 Derived Mesenchymal Stem Cells, Library DGF.DS21042 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2012/6/26:
ANALYSIS XML file 'uw.digitalGenomicFootprinting.level.2.xml' uploaded
alias: DGF.DS21042.hg19.level.2.release.8
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.H1_Derived_Mesenchymal_Stem_Cells.Digital_Genomic_Footprinting.DGF.DS21042.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Digital Genomic Footprinting
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 8
BROWSER_TRACK_NAME: HDMSC DGF 42
BROWSER_TRACK_DESCRIPTION: UW H1 Derived Mesenchymal Stem Cells Digital Genomic Footprinting Library DGF.DS21042 EA Release 8
NUMBER_OF_MAPPED_READS: 243,488,451
NUMBER_OF_DIGITAL_GENOMIC_FOOTPRINTING_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 5
FINDPEAKS_SCORE: 0.5147
FINDPEAKS_PERCENTILE: 80
HOTSPOT_SCORE: 0.5507
HOTSPOT_PERCENTILE: 80
IROC_SCORE: 1.0
IROC_PERCENTILE: 100
POISSON_SCORE: 0.5834
POISSON_PERCENTILE: 80
MAXIMUM_REPLICATE_CORRELATION: NA
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.H1_Derived_Mesenchymal_Stem_Cells.Digital_Genomic_Footprinting.DGF.DS21042.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Digital Genomic Footprinting
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 8
BROWSER_TRACK_NAME: HDMSC DGF 42
BROWSER_TRACK_DESCRIPTION: UW H1 Derived Mesenchymal Stem Cells Digital Genomic Footprinting Library DGF.DS21042 EA Release 8
NUMBER_OF_MAPPED_READS: 243,488,451
NUMBER_OF_DIGITAL_GENOMIC_FOOTPRINTING_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 5
FINDPEAKS_SCORE: 0.5147
FINDPEAKS_PERCENTILE: 80
HOTSPOT_SCORE: 0.5507
HOTSPOT_PERCENTILE: 80
IROC_SCORE: 1.0
IROC_PERCENTILE: 100
POISSON_SCORE: 0.5834
POISSON_PERCENTILE: 80
MAXIMUM_REPLICATE_CORRELATION: NA
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