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Raw Signal Density Graphs of H9 Cell Line Chromatin Accessibility Data
Illumina DNAse-Seq read mappings from the H9 Cell Line, Library DS18522 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2012/5/30:
ANALYSIS XML file 'uw.chromatin.accessibility.level.2.xml' uploaded
alias: DS18522.hg19.level.2.release.7
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.H9.ChromatinAccessibility.DS18522.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 7
BROWSER_TRACK_NAME: H9 DNase 22
BROWSER_TRACK_DESCRIPTION: UW H9 Cell Line DNase Hypersensitivity Library DS18522 EA Release 7
NUMBER_OF_MAPPED_READS: 30,147,140
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 58
FINDPEAKS_SCORE: 0.2019
FINDPEAKS_PERCENTILE: 9
HOTSPOT_SCORE: 0.2112
HOTSPOT_PERCENTILE: 7
IROC_SCORE: 0.9889
IROC_PERCENTILE: 3
POISSON_SCORE: 0.3168
POISSON_PERCENTILE: 10
MAXIMUM_REPLICATE_CORRELATION: 0.99
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.H9.ChromatinAccessibility.DS18522.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 7
BROWSER_TRACK_NAME: H9 DNase 22
BROWSER_TRACK_DESCRIPTION: UW H9 Cell Line DNase Hypersensitivity Library DS18522 EA Release 7
NUMBER_OF_MAPPED_READS: 30,147,140
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 58
FINDPEAKS_SCORE: 0.2019
FINDPEAKS_PERCENTILE: 9
HOTSPOT_SCORE: 0.2112
HOTSPOT_PERCENTILE: 7
IROC_SCORE: 0.9889
IROC_PERCENTILE: 3
POISSON_SCORE: 0.3168
POISSON_PERCENTILE: 10
MAXIMUM_REPLICATE_CORRELATION: 0.99
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