|
|
| Home | Browser | Tools | Log Out |
Help
|
Raw Signal Density Graphs of Fetal Muscle Trunk Chromatin Accessibility Data
Illumina DNAse-Seq read mappings from Fetal Muscle Trunk, Donor H-24409, Library DS20242 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2012/5/30:
ANALYSIS XML file 'uw.chromatin.accessibility.level.2.xml' uploaded
alias: DS20242.hg19.level.2.release.7
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Fetal_Muscle_Trunk.ChromatinAccessibility.H-24409.DS20242.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 7
BROWSER_TRACK_NAME: FMT DNase 09 42
BROWSER_TRACK_DESCRIPTION: UW Fetal Muscle Trunk DNase Hypersensitivity Donor H-24409 Library DS20242 EA Release 7
NUMBER_OF_MAPPED_READS: 49,977,886
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 58
FINDPEAKS_SCORE: 0.4924
FINDPEAKS_PERCENTILE: 71
HOTSPOT_SCORE: 0.4739
HOTSPOT_PERCENTILE: 62
IROC_SCORE: 0.9939
IROC_PERCENTILE: 48
POISSON_SCORE: 0.5254
POISSON_PERCENTILE: 60
MAXIMUM_REPLICATE_CORRELATION: 0.97
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Fetal_Muscle_Trunk.ChromatinAccessibility.H-24409.DS20242.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 7
BROWSER_TRACK_NAME: FMT DNase 09 42
BROWSER_TRACK_DESCRIPTION: UW Fetal Muscle Trunk DNase Hypersensitivity Donor H-24409 Library DS20242 EA Release 7
NUMBER_OF_MAPPED_READS: 49,977,886
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 58
FINDPEAKS_SCORE: 0.4924
FINDPEAKS_PERCENTILE: 71
HOTSPOT_SCORE: 0.4739
HOTSPOT_PERCENTILE: 62
IROC_SCORE: 0.9939
IROC_PERCENTILE: 48
POISSON_SCORE: 0.5254
POISSON_PERCENTILE: 60
MAXIMUM_REPLICATE_CORRELATION: 0.97
|
Genboree is built & maintained by the Bioinformatics Research Laboratory
at Baylor College of Medicine.
Genboree is a hosted service. Code is available
free for academic use.
|
|
|
© 2001-2013 Bioinformatics Research Laboratory
(400D Jewish Wing, MS:BCM225, 1 Baylor Plaza, Houston, TX 77030, 713-798-5433) |
|