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Raw Signal Density Graphs of H1 BMP4 Derived Mesendoderm Cultured Cells Chromatin Accessibility Data
Illumina DNAse-Seq read mappings from the H1 BMP4 Derived Mesendoderm Cultured Cells, Library DS19310 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2012/5/3:
ANALYSIS XML file 'uw.chromatin.accessibility.level.2.xml' uploaded
alias: DS19310.hg19.level.2.release.6
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.ChromatinAccessibility.DS19310.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 6
BROWSER_TRACK_NAME: HBDM DNase 10
BROWSER_TRACK_DESCRIPTION: UW H1 BMP4 Derived Mesendoderm Cultured Cells DNase Hypersensitivity Donor Library DS19310 EA Release 6
NUMBER_OF_MAPPED_READS: 30,822,811
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 63
FINDPEAKS_SCORE: 0.399
FINDPEAKS_PERCENTILE: 59
HOTSPOT_SCORE: 0.4537
HOTSPOT_PERCENTILE: 75
IROC_SCORE: 0.9946
IROC_PERCENTILE: 73
POISSON_SCORE: 0.4899
POISSON_PERCENTILE: 63
MAXIMUM_REPLICATE_CORRELATION: 1.0
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.ChromatinAccessibility.DS19310.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 6
BROWSER_TRACK_NAME: HBDM DNase 10
BROWSER_TRACK_DESCRIPTION: UW H1 BMP4 Derived Mesendoderm Cultured Cells DNase Hypersensitivity Donor Library DS19310 EA Release 6
NUMBER_OF_MAPPED_READS: 30,822,811
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 63
FINDPEAKS_SCORE: 0.399
FINDPEAKS_PERCENTILE: 59
HOTSPOT_SCORE: 0.4537
HOTSPOT_PERCENTILE: 75
IROC_SCORE: 0.9946
IROC_PERCENTILE: 73
POISSON_SCORE: 0.4899
POISSON_PERCENTILE: 63
MAXIMUM_REPLICATE_CORRELATION: 1.0
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