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Raw Signal Density Graphs of Fetal Renal Pelvis Right Chromatin Accessibility Data
Illumina DNAse-Seq read mappings from Fetal Renal Pelvis Right, Donor H-24232, Library DS19235 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2012/5/3:
ANALYSIS XML file 'uw.chromatin.accessibility.level.2.xml' uploaded
alias: DS19235.hg19.level.2.release.6
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Fetal_Renal_Pelvis_Right.ChromatinAccessibility.H-24232.DS19235.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 6
BROWSER_TRACK_NAME: FRPR DNase 32 35
BROWSER_TRACK_DESCRIPTION: UW Fetal Renal Pelvis Right DNase Hypersensitivity Donor H-24232 Library DS19235 EA Release 6
NUMBER_OF_MAPPED_READS: 31,338,934
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 63
FINDPEAKS_SCORE: 0.3362
FINDPEAKS_PERCENTILE: 37
HOTSPOT_SCORE: 0.3274
HOTSPOT_PERCENTILE: 37
IROC_SCORE: 0.9918
IROC_PERCENTILE: 33
POISSON_SCORE: 0.3936
POISSON_PERCENTILE: 24
MAXIMUM_REPLICATE_CORRELATION: 0.97
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Fetal_Renal_Pelvis_Right.ChromatinAccessibility.H-24232.DS19235.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 6
BROWSER_TRACK_NAME: FRPR DNase 32 35
BROWSER_TRACK_DESCRIPTION: UW Fetal Renal Pelvis Right DNase Hypersensitivity Donor H-24232 Library DS19235 EA Release 6
NUMBER_OF_MAPPED_READS: 31,338,934
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 63
FINDPEAKS_SCORE: 0.3362
FINDPEAKS_PERCENTILE: 37
HOTSPOT_SCORE: 0.3274
HOTSPOT_PERCENTILE: 37
IROC_SCORE: 0.9918
IROC_PERCENTILE: 33
POISSON_SCORE: 0.3936
POISSON_PERCENTILE: 24
MAXIMUM_REPLICATE_CORRELATION: 0.97
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