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Raw Signal Density Graphs of Fetal Stomach Chromatin Accessibility Data
Illumina DNAse-Seq read mappings from Fetal Stomach, Donor H-24125, Library DS18821 were processed into density graphs of raw signal representing the aligned read density.
Project News:
2012/5/3:
ANALYSIS XML file 'uw.chromatin.accessibility.level.2.xml' uploaded
alias: DS18821.hg19.level.2.release.6
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Fetal_Stomach.ChromatinAccessibility.H-24125.DS18821.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 6
BROWSER_TRACK_NAME: FS DNase 25 21
BROWSER_TRACK_DESCRIPTION: UW Fetal Stomach DNase Hypersensitivity Donor H-24125 Library DS18821 EA Release 6
NUMBER_OF_MAPPED_READS: 35,596,116
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 63
FINDPEAKS_SCORE: 0.2472
FINDPEAKS_PERCENTILE: 8
HOTSPOT_SCORE: 0.2551
HOTSPOT_PERCENTILE: 8
IROC_SCORE: 0.9902
IROC_PERCENTILE: 22
POISSON_SCORE: 0.3394
POISSON_PERCENTILE: 8
MAXIMUM_REPLICATE_CORRELATION: 0.99
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: UW.Fetal_Stomach.ChromatinAccessibility.H-24125.DS18821.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: Chromatin Accessibility
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 0bp
GENOMIC_WINDOW: 150bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 6
BROWSER_TRACK_NAME: FS DNase 25 21
BROWSER_TRACK_DESCRIPTION: UW Fetal Stomach DNase Hypersensitivity Donor H-24125 Library DS18821 EA Release 6
NUMBER_OF_MAPPED_READS: 35,596,116
NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 63
FINDPEAKS_SCORE: 0.2472
FINDPEAKS_PERCENTILE: 8
HOTSPOT_SCORE: 0.2551
HOTSPOT_PERCENTILE: 8
IROC_SCORE: 0.9902
IROC_PERCENTILE: 22
POISSON_SCORE: 0.3394
POISSON_PERCENTILE: 8
MAXIMUM_REPLICATE_CORRELATION: 0.99
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