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Mapping of Fetal Renal Cortex Left Chromatin Accessibility Data
Illumina reads produced by DNAse-Seq on Fetal Renal Cortex Left, Donor H-24169, Library DS18931 were mapped to the human genome using Pash.
Project News:
2012/5/3: ANALYSIS XML file 'uw.chromatin.accessibility.level.1.xml' uploaded
alias: DS18931.hg19.level.1.release.6
Analysis Center: EDACC Analysis File Type: .bed Analysis File Name: UW.Fetal_Renal_Cortex_Left.ChromatinAccessibility.H-24169.DS18931.bed DATA_ANALYSIS_LEVEL: 1 EXPERIMENT_TYPE: Chromatin Accessibility GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19 SOFTWARE: Pash SOFTWARE_VERSION: 3.0 MAXIMUM_ALIGNMENT_LENGTH: Read length MISMATCHES_ALLOWED: 10% of read length ALIGNMENTS_ALLOWED: 1 TREATMENT_OF_MULTIPLE_ALIGNMENTS: If a read maps to more than 1 position it is removed from consideration. TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: None ALIGNMENT_POSTPROCESSING: None RELEASE_NUMBER: Human Epigenome Atlas 6 NUMBER_OF_MAPPED_READS: 23,113,025 NUMBER_OF_CHROMATIN_ACCESSIBILITY_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 63 FINDPEAKS_SCORE: 0.3662 FINDPEAKS_PERCENTILE: 48 HOTSPOT_SCORE: 0.3653 HOTSPOT_PERCENTILE: 49 IROC_SCORE: 0.993 IROC_PERCENTILE: 46 POISSON_SCORE: 0.44 POISSON_PERCENTILE: 46 MAXIMUM_REPLICATE_CORRELATION: 0.97 |
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