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Raw Signal Density Graphs of H1 Derived Mesenchymal Stem Cells Histone H3K18ac ChIP-Seq Data
Illumina Histone H3K18ac ChIP-Seq read mappings from the H1 Derived Mesenchymal Stem Cells, Library AK283, were processed into density graphs of raw signal representing the aligned read density.
Project News:
2012/4/12: ANALYSIS XML file 'ucsd.chip-seq.level.2.xml' uploaded
alias: renlab.H3K18ac.MSC.02.01.hg19.level.2.release.6
Analysis Center: EDACC Analysis File Type: .wig Analysis File Name: UCSD.H1_Derived_Mesenchymal_Stem_Cells.H3K18ac.AK283.wig DATA_ANALYSIS_LEVEL: 2 EXPERIMENT_TYPE: ChIP-Seq GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19 SOFTWARE: In house programs and scripts SOFTWARE_VERSION: NA READ_EXTENSION: 200bp TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained. GENOMIC_WINDOW: 20bp TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None RELEASE_NUMBER: Human Epigenome Atlas 6 BROWSER_TRACK_NAME: HDMSC H3K18ac 83 BROWSER_TRACK_DESCRIPTION: UCSD H1 Derived Mesenchymal Stem Cells Histone H3K18ac Library AK283 EA Release 6 NUMBER_OF_MAPPED_READS: 19,881,715 NUMBER_OF_H3K18ac_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 3 FINDPEAKS_SCORE: 0.3524 FINDPEAKS_PERCENTILE: 100 HOTSPOT_SCORE: 0.4153 HOTSPOT_PERCENTILE: 100 IROC_SCORE: 0.9834 IROC_PERCENTILE: 100 POISSON_SCORE: 0.5671 POISSON_PERCENTILE: 100 MAXIMUM_REPLICATE_CORRELATION: 0.83 |
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