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Raw Signal Density Graphs of H1 Derived Neuronal Progenitor Cultured Cells Histone H4K8ac ChIP-Seq Data
Illumina Histone H4K8ac ChIP-Seq read mappings from the H1 Derived Neuronal Progenitor Cultured Cells, Library AK265, were processed into density graphs of raw signal representing the aligned read density.
Project News:
2012/4/12: ANALYSIS XML file 'ucsd.chip-seq.level.2.xml' uploaded
alias: renlab.H4K8ac.NPC.01.01.hg19.level.2.release.6
Analysis Center: EDACC Analysis File Type: .wig Analysis File Name: UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H4K8ac.AK265.wig DATA_ANALYSIS_LEVEL: 2 EXPERIMENT_TYPE: ChIP-Seq GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19 SOFTWARE: In house programs and scripts SOFTWARE_VERSION: NA READ_EXTENSION: 200bp TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained. GENOMIC_WINDOW: 20bp TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None RELEASE_NUMBER: Human Epigenome Atlas 6 BROWSER_TRACK_NAME: HDNP H4K8ac 65 BROWSER_TRACK_DESCRIPTION: UCSD H1 Derived Neuronal Progenitor Cultured Cells Histone H4K8ac Library AK265 EA Release 6 NUMBER_OF_MAPPED_READS: 29,453,485 NUMBER_OF_H4K8ac_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 3 FINDPEAKS_SCORE: 0.0463 FINDPEAKS_PERCENTILE: 33 HOTSPOT_SCORE: 0.3279 HOTSPOT_PERCENTILE: 67 IROC_SCORE: 0.9412 IROC_PERCENTILE: 33 POISSON_SCORE: 0.428 POISSON_PERCENTILE: 33 MAXIMUM_REPLICATE_CORRELATION: NA |
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