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Raw Signal Density Graphs of Brain Cingulate Gyrus ChIP-Seq Input Data
Illumina ChIP-Seq Input read mappings from Brain Cingulate Gyrus, Donor 149, were processed into density graphs of raw signal representing the aligned read density.
Project News:
2012/4/12: ANALYSIS XML file 'bi.chip-seq.level.2.xml' uploaded
alias: DNA_Lib 621-DNA_Lib 621-DNA_Lib 621.hg19.level.2.release.6
Analysis Center: EDACC Analysis File Type: .wig Analysis File Name: BI.Brain_Cingulate_Gyrus.Input.149.wig DATA_ANALYSIS_LEVEL: 2 EXPERIMENT_TYPE: ChIP-Seq GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19 SOFTWARE: In house programs and scripts SOFTWARE_VERSION: NA READ_EXTENSION: 200bp TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained. GENOMIC_WINDOW: 20bp TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None RELEASE_NUMBER: Human Epigenome Atlas 6 BROWSER_TRACK_NAME: BCG Input 49 21 BROWSER_TRACK_DESCRIPTION: BI Brain Cingulate Gyrus ChIP-Seq Input Donor 149 Library DNA_Lib 621 EA Release 6 NUMBER_OF_MAPPED_READS: 34,797,024 NUMBER_OF_Input_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 15 FINDPEAKS_SCORE: 0.0061 FINDPEAKS_PERCENTILE: 60 HOTSPOT_SCORE: 0.0048 HOTSPOT_PERCENTILE: 40 IROC_SCORE: 1.0 IROC_PERCENTILE: 100 POISSON_SCORE: 0.0341 POISSON_PERCENTILE: 40 MAXIMUM_REPLICATE_CORRELATION: 0.93 |
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