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Raw Signal Density Graphs of CD4+ CD25int CD127+ Tmem Primary Cells Histone H3K27ac ChIP-Seq Data
Illumina Histone H3K27ac ChIP-Seq read mappings from CD4+ CD25int CD127+ Tmem Primary Cells, Donor Donor 62, were processed into density graphs of raw signal representing the aligned read density.


Project News:
2012/4/12:
ANALYSIS XML file 'bi.chip-seq.level.2.xml' uploaded



alias: DNA_Lib 734-DNA_Lib 734-DNA_Lib 734.hg19.level.2.release.6
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: BI.CD4+_CD25int_CD127+_Tmem_Primary_Cells.H3K27ac.Donor_62.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: ChIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained.
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 6
BROWSER_TRACK_NAME: CCCTmem H3K27ac 62 34
BROWSER_TRACK_DESCRIPTION: BI CD4+ CD25int CD127+ Tmem Primary Cells Histone H3K27ac Donor 62 Library DNA_Lib 734 EA Release 6
NUMBER_OF_MAPPED_READS: 8,522,303
NUMBER_OF_H3K27ac_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 5
FINDPEAKS_SCORE: 0.426
FINDPEAKS_PERCENTILE: 80
HOTSPOT_SCORE: 0.4737
HOTSPOT_PERCENTILE: 80
IROC_SCORE: 0.9994
IROC_PERCENTILE: 100
POISSON_SCORE: 0.465
POISSON_PERCENTILE: 80
MAXIMUM_REPLICATE_CORRELATION: NA

 

 


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