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Raw Signal Density Graphs of CD8 Naive Primary Cells Histone H3K27ac ChIP-Seq Data
Illumina Histone H3K27ac ChIP-Seq read mappings from CD8 Naive Primary Cells, Donor Donor 101 8 pooled leukopaks Jan 20 2011, were processed into density graphs of raw signal representing the aligned read density.
Project News:
2011/12/19: ANALYSIS XML file 'bi.chip-seq.level.2.xml' uploaded
alias: DNA_Lib 496-DNA_Lib 496-DNA_Lib 496.hg19.level.2.release.5
Analysis Center: EDACC Analysis File Type: .wig Analysis File Name: BI.CD8_Naive_Primary_Cells.H3K27ac.Donor_101_8_pooled_leukopaks_Jan_20_2011.wig DATA_ANALYSIS_LEVEL: 2 EXPERIMENT_TYPE: ChIP-Seq GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19 SOFTWARE: In house programs and scripts SOFTWARE_VERSION: NA READ_EXTENSION: 200bp TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained. GENOMIC_WINDOW: 20bp TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None RELEASE_NUMBER: Human Epigenome Atlas 5 BROWSER_TRACK_NAME: CD8N H3K27ac 01 96 BROWSER_TRACK_DESCRIPTION: BI CD8 Naive Primary Cells Histone H3K27ac Donor 101 8 pooled leukopaks Jan 20 2011 Library DNA_Lib 496 EA Release 5 NUMBER_OF_MAPPED_READS: 18,506,258 NUMBER_OF_H3K27ac_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 34 FINDPEAKS_SCORE: 0.233 FINDPEAKS_PERCENTILE: 65 HOTSPOT_SCORE: 0.2736 HOTSPOT_PERCENTILE: 56 IROC_SCORE: 0.9993 IROC_PERCENTILE: 91 POISSON_SCORE: 0.2963 POISSON_PERCENTILE: 35 MAXIMUM_REPLICATE_CORRELATION: 0.96 |
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