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Raw Signal Density Graphs of hESC Derived CD184+ Endoderm Cultured Cells ChIP-Seq Input Data
Illumina ChIP-Seq Input read mappings from hESC Derived CD184+ Endoderm Cultured Cells, Donor DNA_Lib 264, were processed into density graphs of raw signal representing the aligned read density.
Project News:
2011/12/19: ANALYSIS XML file 'bi.chip-seq.level.2.xml' uploaded
alias: DNA_Lib 264-DNA_Lib 264-DNA_Lib 264-DNA_Lib 264.hg19.level.2.release.5
Analysis Center: EDACC Analysis File Type: .wig Analysis File Name: BI.hESC_Derived_CD184+_Endoderm_Cultured_Cells.Input.DNA_Lib_264.wig DATA_ANALYSIS_LEVEL: 2 EXPERIMENT_TYPE: ChIP-Seq GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19 SOFTWARE: In house programs and scripts SOFTWARE_VERSION: NA READ_EXTENSION: 200bp TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained. GENOMIC_WINDOW: 20bp TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None RELEASE_NUMBER: Human Epigenome Atlas 5 BROWSER_TRACK_NAME: hDCE Input 64 BROWSER_TRACK_DESCRIPTION: BI hESC Derived CD184+ Endoderm Cultured Cells ChIP-Seq Input Library DNA_Lib 264 EA Release 5 NUMBER_OF_MAPPED_READS: 29,970,166 NUMBER_OF_Input_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 56 FINDPEAKS_SCORE: 0.0055 FINDPEAKS_PERCENTILE: 57 HOTSPOT_SCORE: 0.0082 HOTSPOT_PERCENTILE: 36 IROC_SCORE: 0.0 IROC_PERCENTILE: 33 POISSON_SCORE: 0.0474 POISSON_PERCENTILE: 41 MAXIMUM_REPLICATE_CORRELATION: 0.96 |
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