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Raw Signal Density Graphs of Brain Inferior Temporal Lobe Histone H3K27me3 ChIP-Seq Data
Illumina Histone H3K27me3 ChIP-Seq read mappings from Brain Inferior Temporal Lobe, Donor 112, were processed into density graphs of raw signal representing the aligned read density.
Project News:
2011/12/19:
ANALYSIS XML file 'bi.chip-seq.level.2.xml' uploaded
alias: Lib:XZ:20100924:18--ChIP:XZ:20100914:18:inferior temporal lobe:H3K27Me3.hg19.level.2.release.5
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: BI.Brain_Inferior_Temporal_Lobe.H3K27me3.112.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: ChIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained.
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 5
BROWSER_TRACK_NAME: BITL H3K27me3 12
BROWSER_TRACK_DESCRIPTION: BI Brain Inferior Temporal Lobe Histone H3K27me3 Donor 112 Library Lib:XZ:20100924:18--ChIP:XZ:20100914:18:inferior temporal lobe:H3K27Me3 EA Release 5
NUMBER_OF_MAPPED_READS: 23,510,213
NUMBER_OF_H3K27me3_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 49
FINDPEAKS_SCORE: 0.0181
FINDPEAKS_PERCENTILE: 37
HOTSPOT_SCORE: 0.0987
HOTSPOT_PERCENTILE: 22
IROC_SCORE: 0.7325
IROC_PERCENTILE: 43
POISSON_SCORE: 0.2114
POISSON_PERCENTILE: 33
MAXIMUM_REPLICATE_CORRELATION: 0.88
Analysis Center: EDACC
Analysis File Type: .wig
Analysis File Name: BI.Brain_Inferior_Temporal_Lobe.H3K27me3.112.wig
DATA_ANALYSIS_LEVEL: 2
EXPERIMENT_TYPE: ChIP-Seq
GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19
SOFTWARE: In house programs and scripts
SOFTWARE_VERSION: NA
READ_EXTENSION: 200bp
TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained.
GENOMIC_WINDOW: 20bp
TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None
RELEASE_NUMBER: Human Epigenome Atlas 5
BROWSER_TRACK_NAME: BITL H3K27me3 12
BROWSER_TRACK_DESCRIPTION: BI Brain Inferior Temporal Lobe Histone H3K27me3 Donor 112 Library Lib:XZ:20100924:18--ChIP:XZ:20100914:18:inferior temporal lobe:H3K27Me3 EA Release 5
NUMBER_OF_MAPPED_READS: 23,510,213
NUMBER_OF_H3K27me3_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 49
FINDPEAKS_SCORE: 0.0181
FINDPEAKS_PERCENTILE: 37
HOTSPOT_SCORE: 0.0987
HOTSPOT_PERCENTILE: 22
IROC_SCORE: 0.7325
IROC_PERCENTILE: 43
POISSON_SCORE: 0.2114
POISSON_PERCENTILE: 33
MAXIMUM_REPLICATE_CORRELATION: 0.88
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