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Raw Signal Density Graphs of CD4+ CD25- Th Primary Cells Histone H3K27me3 ChIP-Seq Data
Illumina Histone H3K27me3 ChIP-Seq read mappings from CD4+ CD25- Th Primary Cells, Donor Donor 62, were processed into density graphs of raw signal representing the aligned read density.
Project News:
2011/12/19: ANALYSIS XML file 'bi.chip-seq.level.2.xml' uploaded
alias: DNA_Lib 362-DNA_Lib 362-DNA_Lib 362-DNA_Lib 362.hg19.level.2.release.5
Analysis Center: EDACC Analysis File Type: .wig Analysis File Name: BI.CD4+_CD25-_Th_Primary_Cells.H3K27me3.Donor_62.wig DATA_ANALYSIS_LEVEL: 2 EXPERIMENT_TYPE: ChIP-Seq GENOME_ASSEMBLY: NCBI Build GRCh37/UCSC Build hg19 SOFTWARE: In house programs and scripts SOFTWARE_VERSION: NA READ_EXTENSION: 200bp TREATMENT_OF_IDENTICAL_ALIGNMENTS_OF_MULTIPLE_READS: If multiple reads map to the same start position on the + strand or stop position on the - strand, only a single read is retained. GENOMIC_WINDOW: 20bp TREATMENT_OF_REGIONS_PRONE_TO_MULTIPLE_ALIGNMENTS: None RELEASE_NUMBER: Human Epigenome Atlas 5 BROWSER_TRACK_NAME: CCT H3K27me3 62 62 BROWSER_TRACK_DESCRIPTION: BI CD4+ CD25- Th Primary Cells Histone H3K27me3 Donor 62 Library DNA_Lib 362 EA Release 5 NUMBER_OF_MAPPED_READS: 27,803,194 NUMBER_OF_H3K27me3_EXPERIMENTS_SCORED_IN_THIS_RELEASE: 49 FINDPEAKS_SCORE: 0.0124 FINDPEAKS_PERCENTILE: 29 HOTSPOT_SCORE: 0.1071 HOTSPOT_PERCENTILE: 37 IROC_SCORE: 0.6846 IROC_PERCENTILE: 29 POISSON_SCORE: 0.3353 POISSON_PERCENTILE: 65 MAXIMUM_REPLICATE_CORRELATION: NA |
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